EnhancerDB
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  3. rs7534343[chr1:153484148]
Enhancers that have rs7534343[chr1:153484148]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 153476105 153501977 enh12269
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs7534343[chr1:153484148]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 153483411 153484216 ZNF143 GTRD no Epithelial (MCF-7) 21339481
chr1 153483480 153484242 ZNF143 GTRD no Epithelial (MCF-7) 21339506
chr1 153483514 153484167 ZNF143 GTRD no Epithelial (MCF-7) 21339513
chr1 153483631 153484149 ZNF143 GTRD no Epithelial (MCF-7) 21339517
chr1 153483718 153484215 TCF7L2 GTRD no Colon (HCT116) 21339519
chr1 153484142 153484154 YY1 JASPAR yes 32255033
chr1 153484146 153484160 TLX1 JASPAR yes 32255034
chr1 153484146 153484164 ESR2 JASPAR yes 32255035
chr1 153484147 153484164 ESR1 JASPAR yes 32255036
Genes associated with rs7534343[chr1:153484148], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More