EnhancerDB
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  3. rs753490622[chr1:16509628]
Enhancers that have rs753490622[chr1:16509628]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs753490622[chr1:16509628]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16509625 16509640 FOXP1 JASPAR yes 27032425
chr1 16509626 16509641 FOXP1 JASPAR yes 27032426
chr1 16509627 16509642 FOXP1 JASPAR yes 27032427
chr1 16509627 16509648 IRF1 JASPAR yes 27032428
chr1 16509628 16509643 FOXP1 JASPAR yes 27032429
chr1 16509628 16509649 IRF1 JASPAR yes 27032430
Genes associated with rs753490622[chr1:16509628], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More