EnhancerDB
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  3. rs7538185[chr1:225949423]
Enhancers that have rs7538185[chr1:225949423]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225938095 225960315 enh12725
Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs7538185[chr1:225949423]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225948463 225949437 SOX2 GTRD no Neural Stem Cells (H9) 21385805
chr1 225948582 225949433 SOX2 GTRD no Neural Stem Cells (H9) 21385806
chr1 225948616 225949438 SOX2 GTRD no Neural Stem Cells (H9) 21385807
chr1 225949412 225949424 BHLHE23 JASPAR yes 35768760
chr1 225949413 225949423 OLIG1 JASPAR yes 35768761
chr1 225949413 225949423 OLIG2 JASPAR yes 35768762
chr1 225949413 225949423 OLIG3 JASPAR yes 35768763
Genes associated with rs7538185[chr1:225949423], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More