EnhancerDB
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  3. rs7538579[chr1:19279118]
Enhancers that have rs7538579[chr1:19279118]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19252691 19280920 enh11566
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs7538579[chr1:19279118]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19279113 19279128 STAT2 JASPAR yes 27165541
chr1 19279114 19279128 STAT1 JASPAR yes 27165542
chr1 19279115 19279129 IRF8 JASPAR yes 27165543
chr1 19279115 19279130 IRF9 JASPAR yes 27165544
chr1 19279117 19279132 MEF2A JASPAR yes 27165545
chr1 19279118 19279133 MEF2C JASPAR yes 27165546
Genes associated with rs7538579[chr1:19279118], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More