EnhancerDB
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  3. rs7538652[chr1:151920040]
Enhancers that have rs7538652[chr1:151920040]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 151885865 151921875 enh624
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs7538652[chr1:151920040]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 151919011 151922201 ZNF274 GTRD no Blood (GM12878) 21338583
chr1 151919011 151922201 ZNF274 GTRD no Blood (GM12878) 107830108
chr1 151919741 151920896 ZNF274 GTRD no Blood (GM12878) 21338612
chr1 151919766 151922146 ZNF274 GTRD no Bone Marrow (K562) 21338613
chr1 151919904 151920491 ZNF143 GTRD no Epithelial (MCF-7) 21338614
chr1 151920012 151920365 ZNF143 GTRD no Epithelial (MCF-7) 21338615
chr1 151920024 151920610 ZNF274 GTRD no Blood (GM12878) 21338616
chr1 151920026 151920045 PAX5 JASPAR yes 32206413
chr1 151920036 151920534 ZNF274 GTRD no Blood (GM12878) 21338617
Genes associated with rs7538652[chr1:151920040], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More