EnhancerDB
  1. Home
  2. SNP
  3. rs7540939[chr1:17889615]
Enhancers that have rs7540939[chr1:17889615]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17883825 17906655 enh11558
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs7540939[chr1:17889615]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17889607 17889619 POU2F1 JASPAR yes 27102224
chr1 17889615 17889625 GCM2 JASPAR yes 27102225
Genes associated with rs7540939[chr1:17889615], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More