EnhancerDB
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  3. rs7541451[chr1:27889039]
Enhancers that have rs7541451[chr1:27889039]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs7541451[chr1:27889039]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27882919 27893564 ZNF274 GTRD no Blood (GM12878) 107802590
chr1 27882919 27893564 ZNF274 GTRD no Blood (GM12878) 107802591
chr1 27882919 27893564 ZNF274 GTRD no Blood (GM12878) 107802592
chr1 27889029 27889039 ID4 JASPAR yes 27709420
chr1 27889029 27889039 NHLH1 JASPAR yes 27709421
chr1 27889029 27889039 TCF3 JASPAR yes 27709422
chr1 27889029 27889039 TCF4 JASPAR yes 27709423
chr1 27889030 27889039 SNAI2 JASPAR yes 27709424
Genes associated with rs7541451[chr1:27889039], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More