EnhancerDB
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  3. rs7542424[chr1:28742772]
Enhancers that have rs7542424[chr1:28742772]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28732865 28757735 enh186
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs7542424[chr1:28742772]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28742769 28742780 FOXB1 JASPAR yes 27768308
chr1 28742769 28742780 FOXC1 JASPAR yes 27768309
chr1 28742769 28742781 MEF2A JASPAR yes 27768310
chr1 28742770 28742780 MEF2A JASPAR yes 27768311
chr1 28742771 28742775 TEAD2 TRANSFAC yes 27768312
chr1 28742771 28742776 TBP TRANSFAC yes 27768313
chr1 28742771 28742777 TMF TRANSFAC yes 27768314
Genes associated with rs7542424[chr1:28742772], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More