EnhancerDB
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  3. rs7543004[chr1:8531111]
Enhancers that have rs7543004[chr1:8531111]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8493665 8545435 enh43
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs7543004[chr1:8531111]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8531099 8531112 NR2F1 JASPAR yes 26558981
chr1 8531100 8531118 RARA JASPAR yes 26558982
chr1 8531102 8531115 JUN JASPAR yes 26558983
chr1 8531103 8531111 CREB1 JASPAR yes 26558984
chr1 8531103 8531120 RARA JASPAR yes 26558985
chr1 8531103 8531120 RXRA JASPAR yes 26558986
chr1 8531110 8531118 RHOXF1 JASPAR yes 26558987
Genes associated with rs7543004[chr1:8531111], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More