EnhancerDB
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  3. rs7543196[chr1:54773650]
Enhancers that have rs7543196[chr1:54773650]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54761072 54782679 enh11866
Liver (HepG2) Brain (SK-N-SH) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs7543196[chr1:54773650]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54773635 54773656 IRF1 JASPAR yes 28971471
chr1 54773637 54773652 PRDM1 JASPAR yes 28971472
chr1 54773639 54773651 IRF1 JASPAR yes 28971473
chr1 54773646 54773652 LEF1 TRANSFAC yes 28971474
chr1 54773646 54773652 SOX10 JASPAR yes 28971475
chr1 54773648 54773663 HNF4A JASPAR yes 28971476
Genes associated with rs7543196[chr1:54773650], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More