EnhancerDB
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  3. rs7548884[chr1:180483099]
Enhancers that have rs7548884[chr1:180483099]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 180482964 180504974 enh12423
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs7548884[chr1:180483099]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 180482136 180483150 ZNF274 GTRD no Bone Marrow (K562) 21353267
chr1 180482152 180483382 ZNF274 GTRD no Bone Marrow (K562) 21353268
chr1 180482172 180483238 ZNF274 GTRD no Cervix (HeLa-S3) 21353269
chr1 180482226 180483227 ZNF274 GTRD no Bone Marrow (K562) 21353270
chr1 180482238 180483134 ZNF274 GTRD no Bone Marrow (K562) 21353271
chr1 180482515 180483327 ZNF274 GTRD no Cervix (HeLa-S3) 21353277
chr1 180482975 180483462 ZNF274 GTRD no Bone Marrow (K562) 21353278
chr1 180483085 180483099 FOXF2 JASPAR yes 33519354
Genes associated with rs7548884[chr1:180483099], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More