EnhancerDB
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  3. rs7549670[chr1:178917212]
Enhancers that have rs7549670[chr1:178917212]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178892945 178926835 enh769
Epithelial (MCF-7) Large Intestine Ovary Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Placenta Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs7549670[chr1:178917212]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178917200 178917215 HNF4A JASPAR yes 33456303
chr1 178917201 178917216 HNF4G JASPAR yes 33456304
chr1 178917201 178917216 LEF1 JASPAR yes 33456305
chr1 178917202 178917216 TCF7L2 JASPAR yes 33456306
chr1 178917204 178917212 TCF4 TRANSFAC yes 33456307
chr1 178917204 178917214 LEF1 TRANSFAC yes 33456308
Genes associated with rs7549670[chr1:178917212], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More