EnhancerDB
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  3. rs7552850[chr1:153495751]
Enhancers that have rs7552850[chr1:153495751]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 153476105 153501977 enh12269
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs7552850[chr1:153495751]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 153494428 153495821 ZNF274 GTRD no Cervix (HeLa-S3) 21339649
chr1 153494587 153495938 ZNF143 GTRD no Epithelial (MCF-7) 21339653
chr1 153494673 153495930 ZNF143 GTRD no Epithelial (MCF-7) 21339657
chr1 153494812 153496121 TCF7L2 GTRD no Colon (HCT116) 21339674
chr1 153494834 153495861 ZNF143 GTRD no Epithelial (MCF-7) 21339680
chr1 153494857 153496158 ZNF143 GTRD no Epithelial (MCF-7) 21339684
chr1 153494869 153496138 ZNF143 GTRD no Epithelial (MCF-7) 21339686
chr1 153494890 153495752 ZNF143 GTRD no Epithelial (MCF-7) 21339693
chr1 153495440 153496109 TCF7L2 GTRD no Colon (HCT116) 21339705
chr1 153495467 153496191 TCF7L2 GTRD no Colon (HCT116) 21339706
chr1 153495522 153496045 TCF7L2 GTRD no Colon (HCT116) 21339707
chr1 153495552 153496155 ZNF274 GTRD no Bone Marrow (K562) 21339708
chr1 153495642 153496096 ZNF143 GTRD no Epithelial (MCF-7) 21339709
chr1 153495646 153496050 TCF7L2 GTRD no Colon (HCT116) 21339710
chr1 153495751 153495755 NFE TRANSFAC yes 32256779
Genes associated with rs7552850[chr1:153495751], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More