EnhancerDB
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  3. rs75540817[chr11:19973715]
Enhancers that have rs75540817[chr11:19973715]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 19970665 19987395 enh13835
Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
chr11 19973702 19973983 vista9823
VISTA
Transcript factors that have rs75540817[chr11:19973715]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 19971910 19976711 ZNF274 GTRD no Bone Marrow (K562) 107961388
chr11 19972001 19973987 ZNF274 GTRD no Bone Marrow (K562) 107961389
chr11 19972320 19974903 ZNF274 GTRD no Bone Marrow (K562) 107961390
chr11 19972850 19973813 ZNF274 GTRD no Bone Marrow (K562) 107961391
chr11 19973077 19973850 ZNF274 GTRD no Bone Marrow (K562) 107961392
chr11 19973138 19974036 ZNF274 GTRD no Bone Marrow (K562) 107961393
chr11 19973451 19973935 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107961394
chr11 19973557 19973877 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107961395
chr11 19973608 19974232 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21473720
chr11 19973608 19974232 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107961396
chr11 19973608 19974458 TCF7L2 UCSC Txn Factor no Conserved 107961397
chr11 19973620 19973896 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21473721
chr11 19973620 19973896 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107961398
chr11 19973643 19973883 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21473722
chr11 19973643 19973883 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107961399
chr11 19973673 19974289 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21473723
chr11 19973673 19974289 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107961400
chr11 19973682 19974278 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107961401
chr11 19973705 19973716 HOXC12 JASPAR yes 37818352
chr11 19973705 19973716 HOXC12 JASPAR yes 114049424
chr11 19973706 19973716 HOXD11 JASPAR yes 37818353
chr11 19973706 19973716 HOXD11 JASPAR yes 114049425
chr11 19973715 19973720 MYB TRANSFAC yes 37818354
chr11 19973715 19973720 MYB TRANSFAC yes 114049426
Genes associated with rs75540817[chr11:19973715], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More