EnhancerDB
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  3. rs7554818[chr1:27856523]
Enhancers that have rs7554818[chr1:27856523]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27840205 27858326 enh176
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs7554818[chr1:27856523]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27856516 27856533 RARA JASPAR yes 27705689
chr1 27856518 27856528 ALX3 JASPAR yes 27705690
chr1 27856518 27856528 LBX2 JASPAR yes 27705691
chr1 27856518 27856528 MIXL1 JASPAR yes 27705692
chr1 27856519 27856527 LHX9 JASPAR yes 27705693
chr1 27856519 27856527 SHOX JASPAR yes 27705694
Genes associated with rs7554818[chr1:27856523], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 27938575 27961788 - FGR ENSG00000000938.8 27961788 82052 Pancreas 0.194691 394