EnhancerDB
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  3. rs7555392[chr1:52108797]
Enhancers that have rs7555392[chr1:52108797]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52099919 52117655 enh11848
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Uterus Stomach Brain (SK-N-SH) Ovary Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs7555392[chr1:52108797]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52108790 52108800 HOXC10 JASPAR yes 28858573
chr1 52108790 52108800 HOXD11 JASPAR yes 28858574
chr1 52108790 52108801 HOXC11 JASPAR yes 28858575
chr1 52108790 52108801 HOXC12 JASPAR yes 28858576
chr1 52108790 52108801 HOXC13 JASPAR yes 28858577
chr1 52108790 52108801 HOXD12 JASPAR yes 28858578
Genes associated with rs7555392[chr1:52108797], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More