EnhancerDB
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  3. rs7562039[chr2:28943374]
Enhancers that have rs7562039[chr2:28943374]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28928585 28946675 enh18396
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs7562039[chr2:28943374]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28943370 28943377 GATA1 TRANSFAC yes 72673620
chr2 28943372 28943383 CDX2 JASPAR yes 72673621
chr2 28943373 28943377 TEAD2 TRANSFAC yes 72673622
chr2 28943373 28943384 HOXA10 JASPAR yes 72673623
chr2 28943374 28943383 CDX1 JASPAR yes 72673624
chr2 28943374 28943384 HOXA13 JASPAR yes 72673625
chr2 28943374 28943384 HOXB13 JASPAR yes 72673626
chr2 28943374 28943384 HOXD13 JASPAR yes 72673627
Genes associated with rs7562039[chr2:28943374], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More