EnhancerDB
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  3. rs75620545[chr1:203495927]
Enhancers that have rs75620545[chr1:203495927]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203471885 203497995 enh12556
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs75620545[chr1:203495927]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203495417 203496026 ZNF143 GTRD no Epithelial (MCF-7) 21369219
chr1 203495461 203496024 ZNF143 GTRD no Epithelial (MCF-7) 21369220
chr1 203495515 203495957 ZNF143 GTRD no Epithelial (MCF-7) 21369221
chr1 203495641 203496117 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369222
chr1 203495709 203496292 ZNF143 GTRD no Epithelial (MCF-7) 21369223
chr1 203495724 203496413 ZNF143 GTRD no Epithelial (MCF-7) 21369224
chr1 203495745 203496001 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369225
chr1 203495771 203495960 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369226
chr1 203495786 203496241 ZBTB33 GTRD no Brain (SK-N-SH) 21369227
chr1 203495811 203496341 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369228
chr1 203495825 203496341 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369229
chr1 203495879 203496245 ZNF274 GTRD no Cervix (HeLa-S3) 21369230
chr1 203495918 203495933 TFAP2A JASPAR yes 34635719
chr1 203495918 203495933 TFAP2C JASPAR yes 34635720
chr1 203495920 203495935 TFAP2C JASPAR yes 34635721
chr1 203495921 203495933 TFAP2A JASPAR yes 34635722
chr1 203495921 203495933 TFAP2B JASPAR yes 34635723
chr1 203495921 203495933 TFAP2C JASPAR yes 34635724
Genes associated with rs75620545[chr1:203495927], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More