EnhancerDB
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  3. rs7578939[chr2:121670198]
Enhancers that have rs7578939[chr2:121670198]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 121660105 121703500 enh18849
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs7578939[chr2:121670198]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 121670198 121670202 LFA1 TRANSFAC yes 76587956
chr2 121670198 121670212 TLX1 JASPAR yes 76587957
Genes associated with rs7578939[chr2:121670198], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More