EnhancerDB
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  3. rs75831180[chr1:28753021]
Enhancers that have rs75831180[chr1:28753021]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28732865 28757735 enh186
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs75831180[chr1:28753021]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28753017 28753028 DUX4 JASPAR yes 27770182
chr1 28753017 28753028 PHOX2A JASPAR yes 27770183
chr1 28753020 28753030 ALX3 JASPAR yes 27770184
chr1 28753020 28753030 EN2 JASPAR yes 27770185
chr1 28753020 28753030 ESX1 JASPAR yes 27770186
chr1 28753020 28753030 GBX1 JASPAR yes 27770187
chr1 28753020 28753030 GBX2 JASPAR yes 27770188
chr1 28753020 28753030 GSX1 JASPAR yes 27770189
chr1 28753020 28753030 HESX1 JASPAR yes 27770190
chr1 28753020 28753030 HOXA2 JASPAR yes 27770191
chr1 28753020 28753030 LBX2 JASPAR yes 27770192
chr1 28753020 28753030 LHX2 JASPAR yes 27770193
chr1 28753020 28753030 MIXL1 JASPAR yes 27770194
chr1 28753020 28753030 RAX JASPAR yes 27770195
chr1 28753021 28753025 H1TF2 TRANSFAC yes 27770196
chr1 28753021 28753025 NFE TRANSFAC yes 27770197
chr1 28753021 28753025 SRF TRANSFAC yes 27770198
chr1 28753021 28753029 BARX1 JASPAR yes 27770199
chr1 28753021 28753029 BSX JASPAR yes 27770200
chr1 28753021 28753029 EN1 JASPAR yes 27770201
chr1 28753021 28753029 ISX JASPAR yes 27770202
chr1 28753021 28753029 LHX9 JASPAR yes 27770203
chr1 28753021 28753029 MSX1 JASPAR yes 27770204
chr1 28753021 28753029 MSX2 JASPAR yes 27770205
chr1 28753021 28753029 PRRX1 JASPAR yes 27770206
chr1 28753021 28753029 RAX2 JASPAR yes 27770207
chr1 28753021 28753029 SHOX JASPAR yes 27770208
Genes associated with rs75831180[chr1:28753021], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More