EnhancerDB
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  3. rs75879552[chr16:85560553]
Enhancers that have rs75879552[chr16:85560553]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs75879552[chr16:85560553]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85552393 85565260 ZNF274 GTRD no Bone Marrow (K562) 21726966
chr16 85552393 85565260 ZNF274 GTRD no Bone Marrow (K562) 108214953
chr16 85552393 85565260 ZNF274 GTRD no Bone Marrow (K562) 108214954
chr16 85552393 85565260 ZNF274 GTRD no Bone Marrow (K562) 108214955
chr16 85552472 85565247 ZNF274 GTRD no Bone Marrow (K562) 21726971
chr16 85552472 85565247 ZNF274 GTRD no Bone Marrow (K562) 108214959
chr16 85552472 85565247 ZNF274 GTRD no Bone Marrow (K562) 108214960
chr16 85552472 85565247 ZNF274 GTRD no Bone Marrow (K562) 108214961
chr16 85556892 85574833 ZNF274 GTRD no Bone Marrow (K562) 21727515
chr16 85556892 85574833 ZNF274 GTRD no Bone Marrow (K562) 108215153
chr16 85556892 85574833 ZNF274 GTRD no Bone Marrow (K562) 108215154
chr16 85556892 85574833 ZNF274 GTRD no Bone Marrow (K562) 108215155
chr16 85556892 85574833 ZNF274 GTRD no Bone Marrow (K562) 108215156
chr16 85556892 85574833 ZNF274 GTRD no Bone Marrow (K562) 108215157
chr16 85556892 85574833 ZNF274 GTRD no Bone Marrow (K562) 108215158
chr16 85560104 85563371 ZNF274 GTRD no Bone Marrow (K562) 21727781
chr16 85560132 85562143 ZNF143 GTRD no Epithelial (MCF-7) 21727782
chr16 85560203 85560763 ZNF274 GTRD no Bone Marrow (K562) 21727783
chr16 85560268 85565182 ZNF274 GTRD no Bone Marrow (K562) 21727784
chr16 85560325 85562986 ZNF274 GTRD no Bone Marrow (K562) 21727785
chr16 85560336 85560827 ZNF274 GTRD no Bone Marrow (K562) 21727786
chr16 85560343 85565144 ZNF274 GTRD no Bone Marrow (K562) 21727787
chr16 85560349 85560850 ZNF274 GTRD no Bone Marrow (K562) 21727788
chr16 85560382 85560909 ZNF274 GTRD no Bone Marrow (K562) 21727789
chr16 85560404 85561534 ZNF274 GTRD no Bone Marrow (K562) 21727790
chr16 85560542 85560553 PHOX2A JASPAR yes 12072222
chr16 85560542 85560558 POU4F2 JASPAR yes 12072223
chr16 85560545 85560555 ALX3 JASPAR yes 12072225
chr16 85560545 85560555 GSX1 JASPAR yes 12072226
chr16 85560545 85560555 GSX2 JASPAR yes 12072227
chr16 85560545 85560555 MIXL1 JASPAR yes 12072228
chr16 85560545 85560555 MNX1 JASPAR yes 12072229
chr16 85560545 85560555 NOTO JASPAR yes 12072230
chr16 85560546 85560554 ISX JASPAR yes 12072231
chr16 85560546 85560554 LMX1A JASPAR yes 12072232
chr16 85560546 85560554 LMX1B JASPAR yes 12072233
chr16 85560546 85560554 NKX6-1 JASPAR yes 12072234
chr16 85560546 85560554 NKX6-2 JASPAR yes 12072235
chr16 85560546 85560554 PRRX1 JASPAR yes 12072236
chr16 85560546 85560554 RAX2 JASPAR yes 12072237
chr16 85560546 85560554 SHOX JASPAR yes 12072238
chr16 85560546 85560554 UNCX JASPAR yes 12072239
chr16 85560546 85560554 VAX1 JASPAR yes 12072240
Genes associated with rs75879552[chr16:85560553], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More