EnhancerDB
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  3. rs76038413[chr1:153498957]
Enhancers that have rs76038413[chr1:153498957]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 153476105 153501977 enh12269
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs76038413[chr1:153498957]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 153498617 153499007 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21339712
chr1 153498654 153499162 MYOD GTRD no Muscle (Myoblast) 21339713
chr1 153498754 153498958 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21339714
chr1 153498767 153499023 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21339715
chr1 153498772 153499048 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21339716
chr1 153498943 153498959 SOX4 JASPAR yes 32257379
chr1 153498944 153498959 SOX21 JASPAR yes 32257380
Genes associated with rs76038413[chr1:153498957], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 153963235 153964626 + RPS27 ENSG00000177954.7 153963235 464278 Esophagus 0.07962 1291