EnhancerDB
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  3. rs76054063[chr1:232766466]
Enhancers that have rs76054063[chr1:232766466]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232744026 232773755 enh12786
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Lung Muscle (A673) Heart
Transcript factors that have rs76054063[chr1:232766466]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232765646 232766655 POLR2A UCSC Txn Factor no Conserved 107879437
chr1 232766064 232766731 ZBTB33 GTRD no Lung (A549) 107879469
chr1 232766180 232766603 ZNF143 GTRD no Epithelial (MCF-7) 21392307
chr1 232766326 232766585 ZNF143 GTRD no Epithelial (MCF-7) 21392308
chr1 232766334 232766599 SOX2 GTRD no Neural Stem Cells (H9) 21392309
chr1 232766354 232766629 SOX2 GTRD no Neural Stem Cells (H9) 21392310
chr1 232766357 232766619 SOX2 GTRD no Neural Stem Cells (H9) 21392311
chr1 232766359 232766572 SOX2 GTRD no Neural Stem Cells (H9) 21392312
chr1 232766395 232768366 AR GTRD no Prostate (PC-3) 21392313
chr1 232766422 232766582 SOX2 GTRD no Neural Stem Cells (H9) 21392314
chr1 232766422 232766712 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21392315
chr1 232766460 232766475 ZBTB33 JASPAR yes 36179685
chr1 232766461 232766688 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21392316
chr1 232766464 232766483 PAX5 JASPAR yes 36179686
chr1 232766466 232766479 ELF1 JASPAR yes 36179687
Genes associated with rs76054063[chr1:232766466], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More