EnhancerDB
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  3. rs76072819[chr1:25046687]
Enhancers that have rs76072819[chr1:25046687]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs76072819[chr1:25046687]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25046678 25046690 PKNOX2 JASPAR yes 27522740
chr1 25046679 25046689 FIGLA JASPAR yes 27522741
chr1 25046679 25046689 ID4 JASPAR yes 27522742
chr1 25046679 25046689 MSC JASPAR yes 27522743
chr1 25046679 25046689 TCF3 JASPAR yes 27522744
chr1 25046679 25046689 TCF4 JASPAR yes 27522745
chr1 25046680 25046689 SNAI2 JASPAR yes 27522746
chr1 25046685 25046699 TLX1 JASPAR yes 27522748
Genes associated with rs76072819[chr1:25046687], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More