EnhancerDB
  1. Home
  2. SNP
  3. rs7621825[chr3:56960518]
Enhancers that have rs7621825[chr3:56960518]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 56948005 56967995 enh7237
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs7621825[chr3:56960518]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 56960510 56960525 FOXA1 JASPAR yes 2612262
chr3 56960511 56960523 FOXC2 JASPAR yes 2612263
chr3 56960515 56960527 FOXC2 JASPAR yes 2612264
chr3 56960516 56960528 FOXI1 JASPAR yes 2612265
Genes associated with rs7621825[chr3:56960518], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More