EnhancerDB
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  3. rs76247452[chr5:148297718]
Enhancers that have rs76247452[chr5:148297718]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 148282079 148299015 enh22690
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs76247452[chr5:148297718]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 148297699 148297720 IRF1 JASPAR yes 66773658
chr5 148297702 148297723 IRF1 JASPAR yes 66773661
chr5 148297704 148297719 FOXP1 JASPAR yes 66773662
chr5 148297705 148297720 FOXP1 JASPAR yes 66773663
chr5 148297706 148297721 FOXP1 JASPAR yes 66773664
chr5 148297714 148297725 HOXA10 JASPAR yes 66773665
chr5 148297715 148297725 ALX3 JASPAR yes 66773666
chr5 148297715 148297725 GSX2 JASPAR yes 66773667
chr5 148297715 148297725 MNX1 JASPAR yes 66773668
chr5 148297716 148297724 LMX1A JASPAR yes 66773669
chr5 148297716 148297724 LMX1B JASPAR yes 66773670
chr5 148297716 148297724 NKX6-1 JASPAR yes 66773671
chr5 148297716 148297724 NKX6-2 JASPAR yes 66773672
chr5 148297716 148297724 VAX1 JASPAR yes 66773673
chr5 148297716 148297724 VAX2 JASPAR yes 66773674
chr5 148297716 148297724 VSX1 JASPAR yes 66773675
chr5 148297716 148297724 VSX2 JASPAR yes 66773676
Genes associated with rs76247452[chr5:148297718], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More