EnhancerDB
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  3. rs76300202[chr1:55433270]
Enhancers that have rs76300202[chr1:55433270]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55426360 55441461 enh371
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs76300202[chr1:55433270]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55433259 55433271 TFAP2B JASPAR yes 29011625
chr1 55433259 55433271 TFAP2C JASPAR yes 29011626
chr1 55433259 55433274 TFAP2A JASPAR yes 29011627
chr1 55433259 55433274 TFAP2C JASPAR yes 29011628
chr1 55433260 55433271 TFAP2A JASPAR yes 29011629
chr1 55433266 55433270 LFA1 TRANSFAC yes 29011630
Genes associated with rs76300202[chr1:55433270], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More