EnhancerDB
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  3. rs76346804[chr1:8960520]
Enhancers that have rs76346804[chr1:8960520]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8954605 8983075 enh11478
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs76346804[chr1:8960520]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8960510 8960525 MEF2C JASPAR yes 26606153
chr1 8960514 8960528 FOXF2 JASPAR yes 26606154
chr1 8960514 8960528 ONECUT3 JASPAR yes 26606155
chr1 8960514 8960529 FOXP1 JASPAR yes 26606156
chr1 8960515 8960530 FOXA1 JASPAR yes 26606157
chr1 8960516 8960527 FOXB1 JASPAR yes 26606158
chr1 8960516 8960527 FOXC1 JASPAR yes 26606159
chr1 8960516 8960528 FOXC2 JASPAR yes 26606160
chr1 8960517 8960529 FOXI1 JASPAR yes 26606161
chr1 8960518 8960532 ONECUT2 JASPAR yes 26606162
chr1 8960518 8960532 ONECUT3 JASPAR yes 26606163
chr1 8960518 8960533 FOXP1 JASPAR yes 26606164
chr1 8960518 8960533 HNF1A JASPAR yes 26606165
chr1 8960519 8960533 POU4F1 JASPAR yes 26606166
chr1 8960519 8960534 FOXA1 JASPAR yes 26606167
chr1 8960519 8960535 POU4F3 JASPAR yes 26606168
chr1 8960520 8960531 FOXB1 JASPAR yes 26606169
chr1 8960520 8960531 FOXC1 JASPAR yes 26606170
chr1 8960520 8960531 PROP1 JASPAR yes 26606171
chr1 8960520 8960532 FOXC2 JASPAR yes 26606172
Genes associated with rs76346804[chr1:8960520], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More