EnhancerDB
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  3. rs76401413[chr5:78043177]
Enhancers that have rs76401413[chr5:78043177]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 78038905 78058872 enh8512
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Lung (PC-9) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs76401413[chr5:78043177]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 78043172 78043186 POU4F1 JASPAR yes 63620829
chr5 78043172 78043188 POU4F2 JASPAR yes 63620830
chr5 78043172 78043188 POU4F3 JASPAR yes 63620831
chr5 78043175 78043185 GSX1 JASPAR yes 63620832
chr5 78043175 78043185 GSX2 JASPAR yes 63620833
chr5 78043176 78043184 LMX1A JASPAR yes 63620834
chr5 78043176 78043184 LMX1B JASPAR yes 63620835
chr5 78043176 78043184 NKX6-1 JASPAR yes 63620836
chr5 78043176 78043184 NKX6-2 JASPAR yes 63620837
chr5 78043176 78043184 VAX1 JASPAR yes 63620838
chr5 78043176 78043184 VAX2 JASPAR yes 63620839
chr5 78043176 78043184 VSX1 JASPAR yes 63620840
chr5 78043176 78043184 VSX2 JASPAR yes 63620841
Genes associated with rs76401413[chr5:78043177], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More