EnhancerDB
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Enhancers that have rs76525578[chr17:39812166]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39800139 39815735 enh17152
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Lung (A549) Stomach Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Breast Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
chr17 39811785 39812247 vista24793
VISTA
Transcript factors that have rs76525578[chr17:39812166]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39811353 39812759 ZNF274 GTRD no Blood (GM12878) 108259221
chr17 39811792 39812302 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21758063
chr17 39811792 39812302 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108259222
chr17 39811843 39812239 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21758065
chr17 39811843 39812239 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108259224
chr17 39811851 39812315 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21758066
chr17 39811851 39812315 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108259225
chr17 39811851 39812501 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21758067
chr17 39811851 39812501 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108259226
chr17 39811852 39812402 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21758068
chr17 39811852 39812402 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108259227
chr17 39811888 39812198 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21758069
chr17 39811888 39812198 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108259228
chr17 39811899 39812375 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21758070
chr17 39811899 39812375 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108259229
chr17 39811925 39812235 STAT3 UCSC Txn Factor no Conserved 108259230
chr17 39811933 39812204 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21758071
chr17 39811933 39812204 TFAP2C UCSC Txn Factor no Conserved 108259231
chr17 39811933 39812204 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108259232
chr17 39812100 39812953 ZNF143 GTRD no Epithelial (MCF-7) 21758073
chr17 39812100 39812953 ZNF143 GTRD no Epithelial (MCF-7) 108259234
chr17 39812104 39813037 ZNF143 GTRD no Epithelial (MCF-7) 21758074
chr17 39812104 39813037 ZNF143 GTRD no Epithelial (MCF-7) 108259235
chr17 39812141 39813002 ZNF143 GTRD no Epithelial (MCF-7) 21758075
chr17 39812141 39813002 ZNF143 GTRD no Epithelial (MCF-7) 108259236
chr17 39812160 39812170 RELA JASPAR yes 21238941
chr17 39812160 39812170 RELA JASPAR yes 54269149
chr17 39812162 39812181 PAX5 JASPAR yes 21238942
chr17 39812162 39812181 PAX5 JASPAR yes 54269150
chr17 39812165 39813091 ZNF143 GTRD no Epithelial (MCF-7) 21758076
chr17 39812165 39813091 ZNF143 GTRD no Epithelial (MCF-7) 108259237
Genes associated with rs76525578[chr17:39812166], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More