EnhancerDB
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  3. rs76544374[chr16:89385293]
Enhancers that have rs76544374[chr16:89385293]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89371847 89409975 enh16905
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr16 89384737 89387643 vista670
VISTA
Transcript factors that have rs76544374[chr16:89385293]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89385286 89385301 TFAP2A JASPAR yes 12330550
chr16 89385286 89385301 TFAP2C JASPAR yes 12330551
chr16 89385288 89385303 TFAP2A JASPAR yes 12330552
chr16 89385288 89385303 TFAP2C JASPAR yes 12330553
chr16 89385289 89385300 TFAP2A JASPAR yes 12330554
chr16 89385289 89385300 TFAP2B JASPAR yes 12330555
chr16 89385289 89385300 TFAP2C JASPAR yes 12330556
chr16 89385289 89385301 TFAP2A JASPAR yes 12330557
chr16 89385289 89385301 TFAP2B JASPAR yes 12330558
chr16 89385289 89385301 TFAP2C JASPAR yes 12330559
Genes associated with rs76544374[chr16:89385293], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More