EnhancerDB
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  3. rs76550017[chr12:56448200]
Enhancers that have rs76550017[chr12:56448200]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 56438391 56456078 enh2386
Bone Marrow (K562) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Blood (T-cell) Stomach
Transcript factors that have rs76550017[chr12:56448200]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 56447381 56448312 ZNF274 GTRD no Bone Marrow (K562) 21550949
chr12 56447458 56448367 ZNF274 GTRD no Bone Marrow (K562) 21550950
chr12 56447563 56448229 ZNF274 GTRD no Bone Marrow (K562) 21550951
chr12 56447582 56448275 ZNF274 GTRD no Bone Marrow (K562) 21550952
chr12 56447670 56450117 ZNF274 GTRD no Bone Marrow (K562) 21550953
chr12 56447699 56448371 ZNF274 GTRD no Bone Marrow (K562) 21550954
chr12 56447760 56448431 ZNF274 GTRD no Bone Marrow (K562) 21550955
chr12 56447812 56448245 ZNF274 GTRD no Bone Marrow (K562) 21550956
chr12 56447862 56448781 TCF7L2 GTRD no Colon (HCT116) 21550957
chr12 56448015 56449557 TCF7L2 GTRD no Colon (HCT116) 21550958
chr12 56448070 56448552 TCF7L2 GTRD no Colon (HCT116) 21550959
chr12 56448114 56449563 TCF7L2 GTRD no Colon (HCT116) 21550960
chr12 56448198 56448212 RORA JASPAR yes 121088727
Genes associated with rs76550017[chr12:56448200], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More