EnhancerDB
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  3. rs76562384[chr12:50952366]
Enhancers that have rs76562384[chr12:50952366]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs76562384[chr12:50952366]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50952346 50952367 IRF1 JASPAR yes 120843659
chr12 50952353 50952366 POU2F2 JASPAR yes 120843660
chr12 50952358 50952367 SRY JASPAR yes 120843661
chr12 50952360 50952369 SOX9 JASPAR yes 120843662
Genes associated with rs76562384[chr12:50952366], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More