EnhancerDB
  1. Home
  2. SNP
  3. rs76564042[chr1:54849397]
Enhancers that have rs76564042[chr1:54849397]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54820685 54854719 enh11867
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs76564042[chr1:54849397]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54849387 54849398 YY2 JASPAR yes 28980879
chr1 54849393 54849397 YY1 TRANSFAC yes 28980880
chr1 54849394 54849405 TBX2 JASPAR yes 28980881
chr1 54849396 54849399 MYB TRANSFAC yes 28980882
chr1 54849396 54849412 GLIS1 JASPAR yes 28980883
Genes associated with rs76564042[chr1:54849397], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More