EnhancerDB
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Enhancers that have rs76717358[chr17:55976349]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55962618 55979623 enh17245
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Colon (HCT116) Uterus Thyroid Adrenal Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Heart
chr17 55976255 55976501 vista25261
VISTA
Transcript factors that have rs76717358[chr17:55976349]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55976129 55976729 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108274691
chr17 55976161 55976681 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108274692
chr17 55976255 55976565 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108274693
chr17 55976264 55976600 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108274694
chr17 55976264 55976640 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108274695
chr17 55976274 55976835 ZNF143 GTRD no Epithelial (MCF-7) 108274696
chr17 55976288 55976578 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108274697
chr17 55976298 55976654 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21773831
chr17 55976298 55976654 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108274698
chr17 55976303 55976647 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108274699
chr17 55976335 55976595 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108274700
chr17 55976344 55976353 THAP1 JASPAR yes 21261056
chr17 55976344 55976353 THAP1 JASPAR yes 54996703
chr17 55976347 55976351 LFA1 TRANSFAC yes 21261057
chr17 55976347 55976351 LFA1 TRANSFAC yes 54996704
Genes associated with rs76717358[chr17:55976349], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More