EnhancerDB
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  3. rs76858550[chr1:55023751]
Enhancers that have rs76858550[chr1:55023751]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55021705 55049987 enh11873
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs76858550[chr1:55023751]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55023741 55023751 HOXC10 JASPAR yes 28991934
chr1 55023742 55023752 HOXA2 JASPAR yes 28991935
chr1 55023742 55023754 CREB1 JASPAR yes 28991936
chr1 55023743 55023751 NKX6-1 JASPAR yes 28991937
chr1 55023743 55023753 POU6F2 JASPAR yes 28991938
chr1 55023744 55023758 ATF7 JASPAR yes 28991939
chr1 55023744 55023758 BATF3 JASPAR yes 28991940
chr1 55023744 55023758 CREB3 JASPAR yes 28991941
chr1 55023745 55023757 PROX1 JASPAR yes 28991942
chr1 55023745 55023759 XBP1 JASPAR yes 28991943
chr1 55023747 55023752 ATF1 TRANSFAC yes 28991944
chr1 55023747 55023755 CREB1 JASPAR yes 28991945
Genes associated with rs76858550[chr1:55023751], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More