EnhancerDB
  1. Home
  2. SNP
  3. rs77002279[chr1:201743299]
Enhancers that have rs77002279[chr1:201743299]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201710292 201749335 enh12527
Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Thyroid Uterus Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Heart
chr1 201742755 201743343 vista4580
VISTA
Transcript factors that have rs77002279[chr1:201743299]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201738150 201746951 ZNF143 GTRD no Epithelial (MCF-7) 107857100
chr1 201738150 201746951 ZNF143 GTRD no Epithelial (MCF-7) 107857101
chr1 201738150 201746951 ZNF143 GTRD no Epithelial (MCF-7) 107857102
chr1 201738449 201743729 ZNF143 GTRD no Epithelial (MCF-7) 107857103
chr1 201738449 201743729 ZNF143 GTRD no Epithelial (MCF-7) 107857104
chr1 201743112 201743402 ZNF274 GTRD no Liver (HepG2) 107857145
chr1 201743117 201743522 ZNF274 GTRD no Liver (HepG2) 107857146
chr1 201743288 201743300 FOXI1 JASPAR yes 34532017
chr1 201743288 201743300 FOXI1 JASPAR yes 118433169
chr1 201743291 201743306 FOXP1 JASPAR yes 34532018
chr1 201743291 201743306 FOXP1 JASPAR yes 118433170
chr1 201743292 201743313 IRF1 JASPAR yes 34532019
chr1 201743292 201743313 IRF1 JASPAR yes 118433171
chr1 201743295 201743299 TEAD2 TRANSFAC yes 34532020
chr1 201743295 201743299 TEAD2 TRANSFAC yes 118433172
chr1 201743295 201743300 TBP TRANSFAC yes 34532021
chr1 201743295 201743300 TBP TRANSFAC yes 118433173
chr1 201743297 201743318 ZNF263 JASPAR yes 34532022
chr1 201743297 201743318 ZNF263 JASPAR yes 118433174
Genes associated with rs77002279[chr1:201743299], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More