EnhancerDB
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  3. rs77042499[chr6:111871080]
Enhancers that have rs77042499[chr6:111871080]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 111869465 111876495 enh23513
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs77042499[chr6:111871080]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 111871069 111871080 HOXC13 JASPAR yes 104352983
chr6 111871069 111871084 HNF1A JASPAR yes 104352984
chr6 111871070 111871080 GSX1 JASPAR yes 104352985
chr6 111871070 111871080 GSX2 JASPAR yes 104352986
chr6 111871070 111871080 HOXB3 JASPAR yes 104352987
chr6 111871071 111871081 POU6F2 JASPAR yes 104352990
Genes associated with rs77042499[chr6:111871080], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More