EnhancerDB
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  3. rs77055541[chr1:185618124]
Enhancers that have rs77055541[chr1:185618124]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 185611645 185629075 enh12480
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs77055541[chr1:185618124]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 185618119 185618132 TFAP2A JASPAR yes 33830434
chr1 185618119 185618132 TFAP2B JASPAR yes 33830435
chr1 185618119 185618132 TFAP2C JASPAR yes 33830436
chr1 185618122 185618138 GLIS1 JASPAR yes 33830437
Genes associated with rs77055541[chr1:185618124], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More