EnhancerDB
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  3. rs771241929[chr1:16516303]
Enhancers that have rs771241929[chr1:16516303]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs771241929[chr1:16516303]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16516298 16516313 MEF2C JASPAR yes 27033591
chr1 16516299 16516314 MEF2A JASPAR yes 27033592
chr1 16516301 16516316 FOXP1 JASPAR yes 27033593
chr1 16516302 16516308 TBP TRANSFAC yes 27033594
chr1 16516302 16516317 FOXP1 JASPAR yes 27033595
chr1 16516302 16516323 IRF1 JASPAR yes 27033596
chr1 16516303 16516318 FOXP1 JASPAR yes 27033597
chr1 16516303 16516324 IRF1 JASPAR yes 27033598
Genes associated with rs771241929[chr1:16516303], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More