EnhancerDB
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  3. rs77170313[chr11:13134275]
Enhancers that have rs77170313[chr11:13134275]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 13110005 13145006 enh28608
Bone Marrow (K562) Astrocyte Colon (HCT116) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs77170313[chr11:13134275]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 13134147 13134529 SOX2 GTRD no Neural Stem Cells (H9) 21472509
chr11 13134149 13134353 SOX2 GTRD no Neural Stem Cells (H9) 21472510
chr11 13134149 13134401 SOX2 GTRD no Neural Stem Cells (H9) 21472511
chr11 13134254 13134275 IRF1 JASPAR yes 37505620
chr11 13134266 13136410 ZNF274 GTRD no Liver (HepG2) 21472512
Genes associated with rs77170313[chr11:13134275], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More