EnhancerDB
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  3. rs77173839[chr1:232752733]
Enhancers that have rs77173839[chr1:232752733]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232744026 232773755 enh12786
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Lung Muscle (A673) Heart
Transcript factors that have rs77173839[chr1:232752733]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232752723 232752733 EN2 JASPAR yes 36177621
chr1 232752723 232752733 ESX1 JASPAR yes 36177622
chr1 232752723 232752733 GBX1 JASPAR yes 36177623
chr1 232752723 232752733 GBX2 JASPAR yes 36177624
chr1 232752723 232752733 HESX1 JASPAR yes 36177625
chr1 232752723 232752733 LBX2 JASPAR yes 36177626
chr1 232752723 232752733 LHX2 JASPAR yes 36177627
chr1 232752723 232752733 MIXL1 JASPAR yes 36177628
chr1 232752723 232752733 RAX JASPAR yes 36177629
chr1 232752724 232752733 VENTX JASPAR yes 36177632
chr1 232752724 232752738 ONECUT1 JASPAR yes 36177633
chr1 232752724 232752738 ONECUT2 JASPAR yes 36177634
chr1 232752724 232752738 ONECUT3 JASPAR yes 36177635
chr1 232752725 232752735 CUX1 JASPAR yes 36177636
chr1 232752725 232752735 CUX2 JASPAR yes 36177637
chr1 232752725 232752735 PAX3 JASPAR yes 36177638
chr1 232752725 232752735 PAX7 JASPAR yes 36177639
chr1 232752727 232752737 LHX6 JASPAR yes 36177640
Genes associated with rs77173839[chr1:232752733], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More