EnhancerDB
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  3. rs77273220[chr6:24996617]
Enhancers that have rs77273220[chr6:24996617]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 24994525 25030795 enh9006
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
Transcript factors that have rs77273220[chr6:24996617]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 24996420 24996744 CEBPB UCSC Txn Factor no Conserved 108539104
chr6 24996607 24996617 HOXD13 JASPAR yes 100810856
chr6 24996607 24996618 HOXA10 JASPAR yes 100810857
chr6 24996608 24996618 ALX3 JASPAR yes 100810858
chr6 24996608 24996618 GSX1 JASPAR yes 100810859
chr6 24996608 24996618 GSX2 JASPAR yes 100810860
chr6 24996608 24996618 HOXB2 JASPAR yes 100810861
chr6 24996608 24996618 HOXB3 JASPAR yes 100810862
chr6 24996608 24996618 MEOX2 JASPAR yes 100810863
chr6 24996608 24996618 MIXL1 JASPAR yes 100810864
chr6 24996608 24996618 MNX1 JASPAR yes 100810865
chr6 24996609 24996617 LMX1A JASPAR yes 100810866
chr6 24996609 24996617 LMX1B JASPAR yes 100810867
chr6 24996609 24996617 NKX6-1 JASPAR yes 100810868
chr6 24996609 24996617 NKX6-2 JASPAR yes 100810869
chr6 24996609 24996617 PDX1 JASPAR yes 100810870
chr6 24996609 24996617 VAX1 JASPAR yes 100810871
chr6 24996609 24996617 VAX2 JASPAR yes 100810872
chr6 24996609 24996617 VSX1 JASPAR yes 100810873
Genes associated with rs77273220[chr6:24996617], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More