EnhancerDB
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  3. rs77435778[chr12:116891853]
Enhancers that have rs77435778[chr12:116891853]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 116889515 116899995 enh15029
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs77435778[chr12:116891853]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 116891546 116893536 ZNF143 GTRD no Epithelial (MCF-7) 108061659
chr12 116891842 116891856 PLAG1 JASPAR yes 123997261
chr12 116891847 116891854 E2F1 TRANSFAC yes 123997262
chr12 116891852 116891873 IRF1 JASPAR yes 123997263
Genes associated with rs77435778[chr12:116891853], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More