EnhancerDB
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Enhancers that have rs77506254[chr17:43201942]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43198065 43204415 enh32207
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs77506254[chr17:43201942]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43201377 43201953 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21763137
chr17 43201377 43201953 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108263811
chr17 43201384 43202176 POLR2A UCSC Txn Factor no Conserved 108263815
chr17 43201401 43202025 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21763145
chr17 43201401 43202025 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108263824
chr17 43201479 43202130 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21763164
chr17 43201479 43202130 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108263856
chr17 43201923 43201944 REST JASPAR yes 54430901
chr17 43201937 43201948 FOXA1 JASPAR yes 54430905
chr17 43201938 43201955 RARA JASPAR yes 54430906
chr17 43201939 43201958 CTCF JASPAR yes 54430907
Genes associated with rs77506254[chr17:43201942], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 42219274 42239844 + C17orf53 ENSG00000125319.10 42219274 962098 Breast 0.455854 15915