EnhancerDB
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  3. rs77545398[chr6:37207668]
Enhancers that have rs77545398[chr6:37207668]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 37204065 37216255 enh23205
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs77545398[chr6:37207668]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 37207659 37207669 POU6F2 JASPAR yes 101401054
chr6 37207660 37207670 GSX2 JASPAR yes 101401055
chr6 37207660 37207671 HOXC11 JASPAR yes 101401056
chr6 37207660 37207671 HOXC13 JASPAR yes 101401057
chr6 37207660 37207671 HOXD12 JASPAR yes 101401058
chr6 37207661 37207669 NKX6-1 JASPAR yes 101401059
chr6 37207661 37207669 NKX6-2 JASPAR yes 101401060
chr6 37207661 37207671 HOXC10 JASPAR yes 101401061
chr6 37207661 37207671 HOXD13 JASPAR yes 101401062
chr6 37207664 37207679 FOXP1 JASPAR yes 101401064
chr6 37207665 37207680 FOXP1 JASPAR yes 101401065
chr6 37207666 37207672 TBP TRANSFAC yes 101401066
chr6 37207666 37207681 FOXP1 JASPAR yes 101401067
chr6 37207666 37207687 IRF1 JASPAR yes 101401068
chr6 37207667 37207682 FOXP1 JASPAR yes 101401069
chr6 37207667 37207688 IRF1 JASPAR yes 101401070
chr6 37207668 37207683 FOXP1 JASPAR yes 101401071
Genes associated with rs77545398[chr6:37207668], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More