EnhancerDB
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  3. rs77780477[chr1:40400961]
Enhancers that have rs77780477[chr1:40400961]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40395645 40411775 enh11770
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Lung Placenta Breast Lung (PC-9) Pancreas Muscle (Myotube) Uterus Stomach
Transcript factors that have rs77780477[chr1:40400961]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40398439 40405814 ZNF274 GTRD no Blood (GM12878) 107802908
chr1 40400944 40400965 IRF1 JASPAR yes 28301136
chr1 40400945 40400966 IRF1 JASPAR yes 28301138
chr1 40400946 40400961 FOXP1 JASPAR yes 28301139
chr1 40400946 40400967 IRF1 JASPAR yes 28301140
chr1 40400947 40400962 FOXP1 JASPAR yes 28301141
chr1 40400947 40400968 IRF1 JASPAR yes 28301142
chr1 40400948 40400963 FOXP1 JASPAR yes 28301143
chr1 40400949 40400970 IRF1 JASPAR yes 28301144
chr1 40400950 40400965 FOXP1 JASPAR yes 28301145
chr1 40400951 40400966 STAT2 JASPAR yes 28301146
chr1 40400952 40400967 FOXP1 JASPAR yes 28301147
chr1 40400953 40400974 IRF1 JASPAR yes 28301148
chr1 40400955 40400976 IRF1 JASPAR yes 28301149
Genes associated with rs77780477[chr1:40400961], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More