EnhancerDB
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  3. rs77788780[chr1:112145975]
Enhancers that have rs77788780[chr1:112145975]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 112128419 112151455 enh566
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
Transcript factors that have rs77788780[chr1:112145975]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 112145967 112145979 FOXC2 JASPAR yes 31532869
chr1 112145969 112145983 TCF7L2 JASPAR yes 31532870
chr1 112145969 112145984 LEF1 JASPAR yes 31532871
chr1 112145974 112145980 SOX10 JASPAR yes 31532872
Genes associated with rs77788780[chr1:112145975], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More