EnhancerDB
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  3. rs778152621[chr18:55450035]
Enhancers that have rs778152621[chr18:55450035]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55430385 55468195 enh17731
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs778152621[chr18:55450035]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55450025 55450046 IRF1 JASPAR yes 110885399
chr18 55450027 55450048 IRF1 JASPAR yes 110885400
chr18 55450029 55450050 IRF1 JASPAR yes 110885401
chr18 55450030 55450051 IRF1 JASPAR yes 110885402
chr18 55450031 55450046 STAT2 JASPAR yes 110885403
chr18 55450031 55450052 IRF1 JASPAR yes 110885404
chr18 55450032 55450047 FOXP1 JASPAR yes 110885405
chr18 55450032 55450053 IRF1 JASPAR yes 110885406
chr18 55450033 55450054 IRF1 JASPAR yes 110885407
chr18 55450034 55450049 FOXP1 JASPAR yes 110885408
chr18 55450034 55450055 IRF1 JASPAR yes 110885409
chr18 55450035 55450050 FOXP1 JASPAR yes 110885410
chr18 55450035 55450056 IRF1 JASPAR yes 110885411
Genes associated with rs778152621[chr18:55450035], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More