EnhancerDB
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  3. rs77823005[chr1:153479071]
Enhancers that have rs77823005[chr1:153479071]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 153476105 153501977 enh12269
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs77823005[chr1:153479071]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 153477945 153479566 ZNF143 GTRD no Epithelial (MCF-7) 21339427
chr1 153478074 153479526 ZNF143 GTRD no Epithelial (MCF-7) 21339428
chr1 153478117 153479248 ZNF143 GTRD no Epithelial (MCF-7) 21339429
chr1 153478186 153479436 ZNF143 GTRD no Epithelial (MCF-7) 21339430
chr1 153478218 153479369 ZNF143 GTRD no Epithelial (MCF-7) 21339431
chr1 153478256 153479080 ZNF143 GTRD no Epithelial (MCF-7) 21339432
chr1 153478320 153479488 ZNF143 GTRD no Epithelial (MCF-7) 21339433
chr1 153478334 153479231 ZNF143 GTRD no Epithelial (MCF-7) 21339434
chr1 153478340 153479248 ZNF143 GTRD no Epithelial (MCF-7) 21339435
chr1 153478354 153479432 ZNF143 GTRD no Epithelial (MCF-7) 21339436
chr1 153478359 153479434 ZNF274 GTRD no Cervix (HeLa-S3) 21339437
chr1 153478530 153479104 ZNF143 GTRD no Epithelial (MCF-7) 21339438
chr1 153478600 153479308 ZNF143 GTRD no Epithelial (MCF-7) 21339439
chr1 153478609 153479985 ZNF274 GTRD no Cervix (HeLa-S3) 21339440
chr1 153478664 153479090 ZNF143 GTRD no Epithelial (MCF-7) 21339441
chr1 153478697 153479096 ZNF143 GTRD no Epithelial (MCF-7) 21339442
chr1 153478725 153479147 ZNF143 GTRD no Epithelial (MCF-7) 21339443
chr1 153479055 153479075 ESR1 JASPAR yes 32254263
chr1 153479061 153479074 SMAD2 JASPAR yes 32254265
chr1 153479066 153479082 ZNF143 JASPAR yes 32254266
Genes associated with rs77823005[chr1:153479071], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More